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Transcriptomic Landscape and Regulatory Pathways of Drought Response in Rice (Oryza sativa L.): A Meta-Analysis of Microarray and RNA-Seq Data

Medicina

MetanáliseNível 1 · Evidência consolidadaInternational journal of molecular sciences31 mar 20261 citações

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Resumo original em inglês

O que aconteceu

Drought significantly disrupts rice productivity under increasing climate volatility. Identifying robust molecular determinants for resilience remains a critical priority for crop improvement. Following the PRISMA guidelines, we performed a large-scale, dual-platform meta-analysis of RNA-Seq and microarray datasets to elucidate the robust transcriptomic landscape of Oryza sativa underwater deficit. Tissue-specific regulatory pathways were identified using STRING, g:Profiler, and PANTHER. Our analysis resolved distinct functional divergence, where shoots prioritize photosynthetic adjustment while roots emphasize transcriptional and chromatin reprogramming. Beyond validating core ABA signaling, we uncover a novel metabolic pivot: the activation of glyoxylate and dicarboxylate metabolism to mitigate drought-induced carbon starvation. We further identify specialized transport systems for ions and electrons across organelle membranes, alongside cellular reorganization driven by autophagy and actin-dependent cytoskeleton remodeling. These findings highlight a sophisticated network of survival strategies governing energy conservation and structural adaptation. By synthesizing heterogeneous transcriptomics, this study reveals robust pathways that are overlooked in single-platform investigations. This work provides a prioritized roadmap for utilizing functional validation and precision breeding to accelerate the development of climate-resilient rice cultivars.

Resumo publicado sob licença CC BY. A tradução para o português ainda não chegou a este estudo.

O estudo original

Transcriptomic Landscape and Regulatory Pathways of Drought Response in Rice (Oryza sativa L.): A Meta-Analysis of Microarray and RNA-Seq Data

Maria Kampa, Konstantinos Makropoulos, Aikaterini Goule, Ioannis A Tamposis, Panagiota I Kontou, Pantelis G Bagos, Georgia G Braliou

Descritores MeSH

  • Oryza
  • Gene Expression Regulation, Plant
  • Transcriptome
  • RNA-Seq
  • Gene Expression Profiling
  • Gene Regulatory Networks
  • Droughts
  • Oligonucleotide Array Sequence Analysis
  • Drought Resistance
  • Stress, Physiological

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